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Research Skills

Research Skills

Wet Laboratory Skills

  1. Light & Compound Microscopy,

  2. Microbial Cell Culture,

  3. PCR & PCR-product purification,

  4. Isolation and Quantification of Plasmid and Genomic DNA, Restriction Digestion, Agarose Gel Electrophoresis,

  5. Western Blotting,

  6. DNA extraction, RNA extraction and cDNA synthesis and quantification,

  7. Basic cell culture techniques including maintaining cells, Harvesting, Seeding, Freezing Basic laboratory maintenance, etc.

Computational Skills

  1. Sequence Analysis,

  2. Phylogenetic Tree Analysis,

  3. Biological Data Mining,

  4. Protein-Protein Interaction Analysis,

  5. Homology Modeling,

  6. Molecular Docking,

  7. Ligand and Structure-based Virtual Screening,

  8. Pharmacophore Analysis. 

Genomic and Statistical Analysis tools

  1. Software- PythDock, VPython, Pymol, ChemoPy, EasyModeller 4.0, Modeller, Autodock Vina, Autodock 4, DataWarrior software, UCSF Chimera software, RasMol software, OpenBabel software, Avogrado software, LIGPLOT Software, Molegro Virtual Docker Software, OpenStructure Software, MolScore-Drugs Software, QikProp Software, GastroPlus Software, ADMET Predictor Software,  VolSurf Software, Discovery Studio ADMET Software, ADMET Predictor Software, HazardExpert Pro Software, MedChem Studio Software, ACD/Tox Suite Software, ClustalW Accelrys, EndNote, GraphPad Prism, ChemOffice, KNIME3.5.2, Accelrys Material Studio, , VMD, NAMD, Accelrys Discovery Studio.

  2. Databases- NCBI, UCSC genome browser, CLC sequence viewer I-TASSER, CPHModel server, Swiss model server, VERIFY3D server, PROCHECK server, Swiss-QMEAN4 server, ChemDiff. Server, Pubchem server, Chembl server, PASS server, PreADMET server, SwissADME server, and so on.

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